Dca9424.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1402)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9424.1 |
24 |
171 |
171 |
40.93 |
148 |
45 |
4e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
334 |
489 |
964 |
16.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9424.1 |
111 |
171 |
171 |
13.45 |
61 |
38 |
2e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
902 |
959 |
1428 |
4.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1402 |
Augustus |
mRNA |
17541 |
18856 |
. |
+ |
. |
ID=Dca9424.1;Parent=Dca9424 |
| scaffold1402 |
Augustus |
exon |
17541 |
17610 |
. |
+ |
. |
ID=Dca9424.1.exon1;Parent=Dca9424.1 |
| scaffold1402 |
Augustus |
exon |
18411 |
18856 |
. |
+ |
. |
ID=Dca9424.1.exon2;Parent=Dca9424.1 |
