Dca9474.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold14044)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9474.1 |
42 |
278 |
278 |
47.48 |
237 |
54 |
1e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
316 |
564 |
964 |
25.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9474.1 |
143 |
278 |
278 |
21.22 |
136 |
44 |
4e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
902 |
1034 |
1428 |
9.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold14044 |
Augustus |
mRNA |
6052 |
8121 |
. |
+ |
. |
ID=Dca9474.1;Parent=Dca9474 |
| scaffold14044 |
Augustus |
exon |
6052 |
6217 |
. |
+ |
. |
ID=Dca9474.1.exon1;Parent=Dca9474.1 |
| scaffold14044 |
Augustus |
exon |
7451 |
8121 |
. |
+ |
. |
ID=Dca9474.1.exon2;Parent=Dca9474.1 |
