Carnation DB

Dca9481.1

Annotation

5-exons
f-1
sp|F6HQ50_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0104g00690#GO:0042765#0F0P1C
AT3G07140.1 | Symbols: | GPI transamidase component Gpi16 subunit family protein | chr3:2261278-2263632 FORWARD LENGTH=644
Repeat List (scaffold1405)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9481.1	55	674	676	58.43	620	63	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HQ50_VITVI	37	663	665	94.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9481.1	46	674	676	55.02	629	60	0
Target_name	Start	End	Length	Cov(%)
AT3G07140.1	29	640	644	95.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1405	Augustus	mRNA	41621	47031	.	+	.	ID=Dca9481.1;Parent=Dca9481
scaffold1405	Augustus	exon	41621	41911	.	+	.	ID=Dca9481.1.exon1;Parent=Dca9481.1
scaffold1405	Augustus	exon	43755	44984	.	+	.	ID=Dca9481.1.exon2;Parent=Dca9481.1
scaffold1405	Augustus	exon	45858	46001	.	+	.	ID=Dca9481.1.exon3;Parent=Dca9481.1
scaffold1405	Augustus	exon	46105	46285	.	+	.	ID=Dca9481.1.exon4;Parent=Dca9481.1
scaffold1405	Augustus	exon	46847	47031	.	+	.	ID=Dca9481.1.exon5;Parent=Dca9481.1