Dca9850.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1425)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9850.1 |
1 |
153 |
155 |
75.48 |
153 |
57 |
2e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
440 |
645 |
1307 |
15.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9850.1 |
27 |
153 |
155 |
33.54 |
127 |
41 |
1e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
603 |
729 |
1428 |
8.89 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1425 |
Augustus |
mRNA |
119373 |
119997 |
. |
- |
. |
ID=Dca9850.1;Parent=Dca9850 |
| scaffold1425 |
Augustus |
exon |
119373 |
119755 |
. |
- |
. |
ID=Dca9850.1.exon1;Parent=Dca9850.1 |
| scaffold1425 |
Augustus |
exon |
119913 |
119997 |
. |
- |
. |
ID=Dca9850.1.exon2;Parent=Dca9850.1 |
