Dca9868.1
Annotation
- 2-exons
- f-1
- sp|Q9SL12_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1426)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9868.1 |
58 |
311 |
316 |
30.69 |
254 |
36 |
3e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SL12_ARATH |
558 |
833 |
977 |
28.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca9868.1 |
182 |
311 |
316 |
17.72 |
130 |
44 |
5e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G24255.1 |
3 |
132 |
746 |
17.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1426 |
Augustus |
mRNA |
61147 |
62642 |
. |
- |
. |
ID=Dca9868.1;Parent=Dca9868 |
| scaffold1426 |
Augustus |
exon |
61147 |
61595 |
. |
- |
. |
ID=Dca9868.1.exon1;Parent=Dca9868.1 |
| scaffold1426 |
Augustus |
exon |
62141 |
62642 |
. |
- |
. |
ID=Dca9868.1.exon2;Parent=Dca9868.1 |
