Carnation DB

Dca9921.1

Annotation

5-exons
f-1
sp|F6H455_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0068g01530#GO:0008270#1F0P0C
AT3G26935.1 | Symbols: | DHHC-type zinc finger family protein | chr3:9933001-9935218 REVERSE LENGTH=443
Repeat List (scaffold143)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9921.1	3	420	430	75.11	418	76	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H455_VITVI	5	428	452	93.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca9921.1	3	425	430	68.83	423	70	0
Target_name	Start	End	Length	Cov(%)
AT3G26935.1	5	426	443	95.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold143	Augus-PASA	mRNA	97501	102173	.	-	.	ID=Dca9921.1;Parent=Dca9921
scaffold143	Augus-PASA	exon	97501	98004	.	-	.	ID=Dca9921.1.exon1;Parent=Dca9921.1
scaffold143	Augus-PASA	exon	98109	98342	.	-	.	ID=Dca9921.1.exon2;Parent=Dca9921.1
scaffold143	Augus-PASA	exon	98760	99050	.	-	.	ID=Dca9921.1.exon3;Parent=Dca9921.1
scaffold143	Augus-PASA	exon	100448	100630	.	-	.	ID=Dca9921.1.exon4;Parent=Dca9921.1
scaffold143	Augus-PASA	exon	102093	102173	.	-	.	ID=Dca9921.1.exon5;Parent=Dca9921.1