Carnation DB

Dca10032.1

Annotation

5-exons
f-1
sp|B9MT91_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_589401#unknown#0F0P0C
AT5G03040.1 | Symbols: iqd2 | IQ-domain 2 | chr5:710380-712406 REVERSE LENGTH=461
Repeat List (scaffold1435)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10032.1	37	521	536	39.92	485	43	2e-93
Target_name	Start	End	Length	Cov(%)
sp\|B9MT91_POPTR	1	456	479	95.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10032.1	37	517	536	36.75	481	40	6e-77
Target_name	Start	End	Length	Cov(%)
AT5G03040.1	1	435	461	94.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1435	Augustus	mRNA	57511	59650	.	-	.	ID=Dca10032.1;Parent=Dca10032
scaffold1435	Augustus	exon	57511	58155	.	-	.	ID=Dca10032.1.exon1;Parent=Dca10032.1
scaffold1435	Augustus	exon	58238	58360	.	-	.	ID=Dca10032.1.exon2;Parent=Dca10032.1
scaffold1435	Augustus	exon	58447	58674	.	-	.	ID=Dca10032.1.exon3;Parent=Dca10032.1
scaffold1435	Augus-PASA	exon	58772	59203	.	-	.	ID=Dca10032.1.exon4;Parent=Dca10032.1
scaffold1435	Augustus	exon	59468	59650	.	-	.	ID=Dca10032.1.exon5;Parent=Dca10032.1