Carnation DB

Dca1006.1

Annotation

5-exons
f-1
sp|D7SXT9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0091g00460#GO:0008270#1F0P0C
Os07t0593200-02 Zinc finger, SWIM-type domain containing protein.
Repeat List (scaffold1028)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1006.1	1	132	132	73.48	132	74	1e-55
Target_name	Start	End	Length	Cov(%)
sp\|D7SXT9_VITVI	1	132	132	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1006.1	1	132	132	68.18	132	69	1e-49
Target_name	Start	End	Length	Cov(%)
AT4G33925.1	1	132	132	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1028	Augus-PASA	mRNA	12081	14062	.	-	.	ID=Dca1006.1;Parent=Dca1006
scaffold1028	Augus-PASA	exon	12081	12182	.	-	.	ID=Dca1006.1.exon1;Parent=Dca1006.1
scaffold1028	Augus-PASA	exon	12435	12542	.	-	.	ID=Dca1006.1.exon2;Parent=Dca1006.1
scaffold1028	Augus-PASA	exon	13665	13770	.	-	.	ID=Dca1006.1.exon3;Parent=Dca1006.1
scaffold1028	Augus-PASA	exon	13874	13895	.	-	.	ID=Dca1006.1.exon4;Parent=Dca1006.1
scaffold1028	Augus-PASA	exon	14002	14062	.	-	.	ID=Dca1006.1.exon5;Parent=Dca1006.1