Carnation DB

Dca1011.1

Annotation

6-exons
f-1
sp|B9HIY1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_564483#unknown#0F0P0C
Repeat List (scaffold1028)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1011.1	1	303	304	75.32	303	76	1e-137
Target_name	Start	End	Length	Cov(%)
sp\|B9HIY1_POPTR	2	304	313	96.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1011.1	1	299	304	72.69	299	74	9e-128
Target_name	Start	End	Length	Cov(%)
AT1G25682.1	2	298	310	95.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1028	Augustus	mRNA	36695	39392	.	-	.	ID=Dca1011.1;Parent=Dca1011
scaffold1028	Augustus	exon	36695	37033	.	-	.	ID=Dca1011.1.exon1;Parent=Dca1011.1
scaffold1028	Augustus	exon	37608	37771	.	-	.	ID=Dca1011.1.exon2;Parent=Dca1011.1
scaffold1028	Augustus	exon	38011	38170	.	-	.	ID=Dca1011.1.exon3;Parent=Dca1011.1
scaffold1028	Augustus	exon	38766	38874	.	-	.	ID=Dca1011.1.exon4;Parent=Dca1011.1
scaffold1028	Augustus	exon	39143	39222	.	-	.	ID=Dca1011.1.exon5;Parent=Dca1011.1
scaffold1028	Augustus	exon	39330	39392	.	-	.	ID=Dca1011.1.exon6;Parent=Dca1011.1