Carnation DB

Dca10127.1

Annotation

5-exons
f-1
sp|A9PG61_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_573862#GO:0003824;GO:0009116#1F1P0C
AT4G24340.1 | Symbols: | Phosphorylase superfamily protein | chr4:12607475-12609148 FORWARD LENGTH=338
Repeat List (scaffold144)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10127.1	4	282	320	36.87	279	40	3e-52
Target_name	Start	End	Length	Cov(%)
sp\|A9PG61_POPTR	11	300	339	85.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10127.1	8	311	320	31.56	304	31	1e-43
Target_name	Start	End	Length	Cov(%)
AT4G24340.1	14	335	338	95.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold144	Augus-PASA	mRNA	260817	263179	.	-	.	ID=Dca10127.1;Parent=Dca10127
scaffold144	Augus-PASA	exon	260817	260984	.	-	.	ID=Dca10127.1.exon1;Parent=Dca10127.1
scaffold144	Augus-PASA	exon	261739	262077	.	-	.	ID=Dca10127.1.exon2;Parent=Dca10127.1
scaffold144	Augus-PASA	exon	262208	262363	.	-	.	ID=Dca10127.1.exon3;Parent=Dca10127.1
scaffold144	Augus-PASA	exon	262547	262614	.	-	.	ID=Dca10127.1.exon4;Parent=Dca10127.1
scaffold144	Augus-PASA	exon	262948	263179	.	-	.	ID=Dca10127.1.exon5;Parent=Dca10127.1