Dca10132.1
Annotation
- 2-exons
- f-1
- sp|Q2R1T8_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g38090#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold1440)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10132.1 |
30 |
607 |
612 |
32.02 |
578 |
33 |
6e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R1T8_ORYSJ |
332 |
901 |
1777 |
32.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10132.1 |
347 |
606 |
612 |
13.39 |
260 |
32 |
1e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
413 |
650 |
1539 |
15.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1440 |
Augustus |
mRNA |
62251 |
65207 |
. |
+ |
. |
ID=Dca10132.1;Parent=Dca10132 |
| scaffold1440 |
Augustus |
exon |
62251 |
64071 |
. |
+ |
. |
ID=Dca10132.1.exon1;Parent=Dca10132.1 |
| scaffold1440 |
Augustus |
exon |
65190 |
65207 |
. |
+ |
. |
ID=Dca10132.1.exon2;Parent=Dca10132.1 |
