Carnation DB

Dca10231.1

Annotation

6-exons
f-1
sp|A5AN06_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021070#GO:0003824#1F0P0C
AT5G40390.1 | Symbols: SIP1 | Raffinose synthase family protein | chr5:16161720-16165085 FORWARD LENGTH=783
Repeat List (scaffold1446)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10231.1	10	71	814	4.54	62	60	1e-11
Target_name	Start	End	Length	Cov(%)
sp\|A5AN06_VITVI	29	90	762	8.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10231.1	10	71	814	4.05	62	46	6e-08
Target_name	Start	End	Length	Cov(%)
AT5G40390.1	27	99	783	9.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1446	Augustus	mRNA	51875	56680	.	-	.	ID=Dca10231.1;Parent=Dca10231
scaffold1446	Augustus	exon	51875	52170	.	-	.	ID=Dca10231.1.exon1;Parent=Dca10231.1
scaffold1446	Augustus	exon	52586	53033	.	-	.	ID=Dca10231.1.exon2;Parent=Dca10231.1
scaffold1446	Augustus	exon	53131	53498	.	-	.	ID=Dca10231.1.exon3;Parent=Dca10231.1
scaffold1446	Augustus	exon	53658	53795	.	-	.	ID=Dca10231.1.exon4;Parent=Dca10231.1
scaffold1446	Augustus	exon	54749	55730	.	-	.	ID=Dca10231.1.exon5;Parent=Dca10231.1
scaffold1446	Augustus	exon	56468	56680	.	-	.	ID=Dca10231.1.exon6;Parent=Dca10231.1