Carnation DB

Dca10245.1

Annotation

5-exons
f-1
sp|A9PGT9_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005488#1F0P0C
AT4G20900.1 | Symbols: MS5, TDM1 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11184103-11185844 REVERSE LENGTH=450
Repeat List (scaffold1447)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10245.1	1	336	480	37.91	336	54	6e-96
Target_name	Start	End	Length	Cov(%)
sp\|A9PGT9_POPTR	1	313	690	45.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10245.1	8	306	480	32.7	299	53	1e-80
Target_name	Start	End	Length	Cov(%)
AT4G20900.1	6	297	450	64.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1447	Augustus	mRNA	49529	51859	.	+	.	ID=Dca10245.1;Parent=Dca10245
scaffold1447	Augustus	exon	49529	49750	.	+	.	ID=Dca10245.1.exon1;Parent=Dca10245.1
scaffold1447	Augustus	exon	50281	50493	.	+	.	ID=Dca10245.1.exon2;Parent=Dca10245.1
scaffold1447	Augustus	exon	50697	50845	.	+	.	ID=Dca10245.1.exon3;Parent=Dca10245.1
scaffold1447	Augustus	exon	50925	51062	.	+	.	ID=Dca10245.1.exon4;Parent=Dca10245.1
scaffold1447	Augustus	exon	51139	51859	.	+	.	ID=Dca10245.1.exon5;Parent=Dca10245.1