Dca10255.1
Annotation
- 2-exons
- f-1
- sp|O81068_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g28980#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold1448)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10255.1 |
70 |
296 |
322 |
31.67 |
227 |
45 |
1e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81068_ARATH |
738 |
964 |
1529 |
14.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10255.1 |
28 |
321 |
322 |
30.43 |
294 |
33 |
8e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
300 |
591 |
857 |
34.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1448 |
Augustus |
mRNA |
22387 |
23804 |
. |
+ |
. |
ID=Dca10255.1;Parent=Dca10255 |
| scaffold1448 |
Augustus |
exon |
22387 |
22446 |
. |
+ |
. |
ID=Dca10255.1.exon1;Parent=Dca10255.1 |
| scaffold1448 |
Augustus |
exon |
22896 |
23804 |
. |
+ |
. |
ID=Dca10255.1.exon2;Parent=Dca10255.1 |
