Dca10316.1
Annotation
- 4-exons
- f-1
- sp|Q2QS28_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g25550#unknown#0F0P0C
- Repeat List (scaffold145)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10316.1 |
1 |
259 |
291 |
47.76 |
259 |
45 |
3e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QS28_ORYSJ |
402 |
715 |
782 |
40.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10316.1 |
3 |
172 |
291 |
22.68 |
170 |
39 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0208400-02 |
642 |
807 |
829 |
20.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold145 |
Augustus |
mRNA |
261978 |
263510 |
. |
- |
. |
ID=Dca10316.1;Parent=Dca10316 |
| scaffold145 |
Augustus |
exon |
261978 |
261992 |
. |
- |
. |
ID=Dca10316.1.exon1;Parent=Dca10316.1 |
| scaffold145 |
Augustus |
exon |
262204 |
262287 |
. |
- |
. |
ID=Dca10316.1.exon2;Parent=Dca10316.1 |
| scaffold145 |
Augustus |
exon |
262410 |
262626 |
. |
- |
. |
ID=Dca10316.1.exon3;Parent=Dca10316.1 |
| scaffold145 |
Augustus |
exon |
262951 |
263510 |
. |
- |
. |
ID=Dca10316.1.exon4;Parent=Dca10316.1 |
