Dca10335.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9C8Q3_ARATH#Polyprotein, putative#Arabidopsis thaliana (Mouse-ear cress)#Name=T4I21.10#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold14503)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10335.1 |
3 |
226 |
250 |
74.8 |
224 |
72 |
5e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
1027 |
1286 |
1717 |
15.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10335.1 |
3 |
215 |
250 |
29.2 |
213 |
30 |
1e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
154 |
398 |
591 |
41.45 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold14503 |
Augustus |
mRNA |
333 |
1348 |
. |
- |
. |
ID=Dca10335.1;Parent=Dca10335 |
| scaffold14503 |
Augustus |
exon |
333 |
851 |
. |
- |
. |
ID=Dca10335.1.exon1;Parent=Dca10335.1 |
| scaffold14503 |
Augustus |
exon |
960 |
1184 |
. |
- |
. |
ID=Dca10335.1.exon2;Parent=Dca10335.1 |
| scaffold14503 |
Augustus |
exon |
1340 |
1348 |
. |
- |
. |
ID=Dca10335.1.exon3;Parent=Dca10335.1 |
