Carnation DB

Dca10371.1

Annotation

12-exons
f-1
sp|B9H4S1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1077353#unknown#0F0P0C
sp|Q4ABN8_BRARP#80A08_29#Brassica rapa subsp pekinensis (Chinese cabbage) (Brassica pekinensis)#Name=80A08_29#unknown#0F0P0C
Repeat List (scaffold1453)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10371.1	62	347	352	53.97	286	66	3e-108
Target_name	Start	End	Length	Cov(%)
sp\|B9H4S1_POPTR	98	389	400	73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10371.1	67	349	352	50	283	62	2e-100
Target_name	Start	End	Length	Cov(%)
AT5G10320.1	121	403	403	70.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1453	Augustus	mRNA	24148	29529	.	-	.	ID=Dca10371.1;Parent=Dca10371
scaffold1453	Augustus	exon	24148	24245	.	-	.	ID=Dca10371.1.exon1;Parent=Dca10371.1
scaffold1453	Augustus	exon	24382	24490	.	-	.	ID=Dca10371.1.exon2;Parent=Dca10371.1
scaffold1453	Augustus	exon	24640	24720	.	-	.	ID=Dca10371.1.exon3;Parent=Dca10371.1
scaffold1453	Augustus	exon	24816	24828	.	-	.	ID=Dca10371.1.exon4;Parent=Dca10371.1
scaffold1453	Augustus	exon	24946	25010	.	-	.	ID=Dca10371.1.exon5;Parent=Dca10371.1
scaffold1453	Augustus	exon	25296	25388	.	-	.	ID=Dca10371.1.exon6;Parent=Dca10371.1
scaffold1453	Augustus	exon	25575	25653	.	-	.	ID=Dca10371.1.exon7;Parent=Dca10371.1
scaffold1453	Augustus	exon	25740	25828	.	-	.	ID=Dca10371.1.exon8;Parent=Dca10371.1
scaffold1453	Augustus	exon	25914	25988	.	-	.	ID=Dca10371.1.exon9;Parent=Dca10371.1
scaffold1453	Augustus	exon	26135	26236	.	-	.	ID=Dca10371.1.exon10;Parent=Dca10371.1
scaffold1453	Augustus	exon	26353	26525	.	-	.	ID=Dca10371.1.exon11;Parent=Dca10371.1
scaffold1453	Augustus	exon	29448	29529	.	-	.	ID=Dca10371.1.exon12;Parent=Dca10371.1