Carnation DB

Dca10467.1

Annotation

6-exons
f-1
sp|A5ATZ0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013041#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold146)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10467.1	2	1268	1268	48.89	1267	45	0
Target_name	Start	End	Length	Cov(%)
sp\|A5ATZ0_VITVI	8	1352	1357	99.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10467.1	57	1268	1268	39.66	1212	37	0
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	118	1478	1539	88.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold146	Augustus	mRNA	43983	48453	.	-	.	ID=Dca10467.1;Parent=Dca10467
scaffold146	Augustus	exon	43983	44780	.	-	.	ID=Dca10467.1.exon1;Parent=Dca10467.1
scaffold146	Augustus	exon	44859	45212	.	-	.	ID=Dca10467.1.exon2;Parent=Dca10467.1
scaffold146	Augustus	exon	45415	46878	.	-	.	ID=Dca10467.1.exon3;Parent=Dca10467.1
scaffold146	Augustus	exon	47011	47205	.	-	.	ID=Dca10467.1.exon4;Parent=Dca10467.1
scaffold146	Augustus	exon	47368	47624	.	-	.	ID=Dca10467.1.exon5;Parent=Dca10467.1
scaffold146	Augustus	exon	47715	48453	.	-	.	ID=Dca10467.1.exon6;Parent=Dca10467.1