Carnation DB

Dca1048.1

Annotation

6-exons
f-1
sp|A5BU71_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_034582#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
Repeat List (scaffold1029)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1048.1	475	1109	1111	25.92	635	40	1e-137
Target_name	Start	End	Length	Cov(%)
sp\|A5BU71_VITVI	412	1122	1881	37.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1048.1	823	1104	1111	8.91	282	35	2e-39
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	557	830	1539	17.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1029	Augustus	mRNA	82551	90143	.	+	.	ID=Dca1048.1;Parent=Dca1048
scaffold1029	Augustus	exon	82551	82865	.	+	.	ID=Dca1048.1.exon1;Parent=Dca1048.1
scaffold1029	Augustus	exon	83764	83824	.	+	.	ID=Dca1048.1.exon2;Parent=Dca1048.1
scaffold1029	Augustus	exon	86278	86494	.	+	.	ID=Dca1048.1.exon3;Parent=Dca1048.1
scaffold1029	Augustus	exon	86783	88011	.	+	.	ID=Dca1048.1.exon4;Parent=Dca1048.1
scaffold1029	Augustus	exon	88116	88688	.	+	.	ID=Dca1048.1.exon5;Parent=Dca1048.1
scaffold1029	Augustus	exon	89203	90143	.	+	.	ID=Dca1048.1.exon6;Parent=Dca1048.1