Carnation DB

Dca10542.1

Annotation

9-exons
f-1
sp|F6HCK3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0149g00120#GO:0005524;GO:0003725;GO:0004386;GO:0004525#4F0P0C
AT5G20320.1 | Symbols: DCL4, ATDCL4 | dicer-like 4 | chr5:6859571-6869068 REVERSE LENGTH=1702
Repeat List (scaffold1464)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10542.1	4	689	691	58.61	686	59	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HCK3_VITVI	563	1234	1239	54.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10542.1	5	689	691	51.23	685	52	0
Target_name	Start	End	Length	Cov(%)
AT5G20320.1	1036	1701	1702	39.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1464	Augus-PASA	mRNA	3399	8080	.	-	.	ID=Dca10542.1;Parent=Dca10542
scaffold1464	Augus-PASA	exon	3399	3552	.	-	.	ID=Dca10542.1.exon1;Parent=Dca10542.1
scaffold1464	Augus-PASA	exon	3639	3753	.	-	.	ID=Dca10542.1.exon2;Parent=Dca10542.1
scaffold1464	Augus-PASA	exon	3863	4184	.	-	.	ID=Dca10542.1.exon3;Parent=Dca10542.1
scaffold1464	Augus-PASA	exon	4622	4948	.	-	.	ID=Dca10542.1.exon4;Parent=Dca10542.1
scaffold1464	Augustus	exon	5340	5609	.	-	.	ID=Dca10542.1.exon5;Parent=Dca10542.1
scaffold1464	Augustus	exon	5690	6154	.	-	.	ID=Dca10542.1.exon6;Parent=Dca10542.1
scaffold1464	Augustus	exon	6947	7156	.	-	.	ID=Dca10542.1.exon7;Parent=Dca10542.1
scaffold1464	Augustus	exon	7275	7480	.	-	.	ID=Dca10542.1.exon8;Parent=Dca10542.1
scaffold1464	Augustus	exon	8074	8080	.	-	.	ID=Dca10542.1.exon9;Parent=Dca10542.1