Dca10570.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1466)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10570.1 |
727 |
896 |
1172 |
9.81 |
170 |
68 |
7e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1209 |
1378 |
1501 |
11.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10570.1 |
354 |
726 |
1172 |
11.43 |
373 |
36 |
5e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
431 |
707 |
53.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1466 |
Augustus |
mRNA |
47216 |
55981 |
. |
- |
. |
ID=Dca10570.1;Parent=Dca10570 |
| scaffold1466 |
Augustus |
exon |
47216 |
47458 |
. |
- |
. |
ID=Dca10570.1.exon1;Parent=Dca10570.1 |
| scaffold1466 |
Augustus |
exon |
50546 |
51134 |
. |
- |
. |
ID=Dca10570.1.exon2;Parent=Dca10570.1 |
| scaffold1466 |
Augustus |
exon |
51294 |
51803 |
. |
- |
. |
ID=Dca10570.1.exon3;Parent=Dca10570.1 |
| scaffold1466 |
Augustus |
exon |
53805 |
55981 |
. |
- |
. |
ID=Dca10570.1.exon4;Parent=Dca10570.1 |
