Carnation DB

Dca10582.1

Annotation

5-exons
f-1
sp|B9S0I3_RICCO#Transitional endoplasmic reticulum ATPase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1355090#GO:0005524;GO:0008568#2F0P0C
Repeat List (scaffold14662)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10582.1	21	266	358	29.05	246	43	6e-54
Target_name	Start	End	Length	Cov(%)
sp\|B9S0I3_RICCO	196	439	805	30.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10582.1	21	260	358	27.93	240	42	8e-55
Target_name	Start	End	Length	Cov(%)
AT5G03340.1	195	431	810	29.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold14662	Augustus	mRNA	2794	4774	.	-	.	ID=Dca10582.1;Parent=Dca10582
scaffold14662	Augustus	exon	2794	3087	.	-	.	ID=Dca10582.1.exon1;Parent=Dca10582.1
scaffold14662	Augustus	exon	3223	3582	.	-	.	ID=Dca10582.1.exon2;Parent=Dca10582.1
scaffold14662	Augustus	exon	4150	4431	.	-	.	ID=Dca10582.1.exon3;Parent=Dca10582.1
scaffold14662	Augustus	exon	4543	4614	.	-	.	ID=Dca10582.1.exon4;Parent=Dca10582.1
scaffold14662	Augustus	exon	4706	4774	.	-	.	ID=Dca10582.1.exon5;Parent=Dca10582.1