Dca10628.1
Annotation
- 4-exons
- f-1
- sp|C5YTX1_SORBI#Putative uncharacterized protein Sb08g007680#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb08g007680#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q8S6P1_ORYSJ#Putative reverse transcriptase#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0073L01.7#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold1469)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10628.1 |
138 |
547 |
586 |
21.33 |
410 |
31 |
1e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5YTX1_SORBI |
86 |
458 |
649 |
57.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10628.1 |
149 |
337 |
586 |
10.92 |
189 |
34 |
6e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
456 |
643 |
857 |
21.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1469 |
Augustus |
mRNA |
56964 |
59663 |
. |
- |
. |
ID=Dca10628.1;Parent=Dca10628 |
| scaffold1469 |
Augustus |
exon |
56964 |
57631 |
. |
- |
. |
ID=Dca10628.1.exon1;Parent=Dca10628.1 |
| scaffold1469 |
Augustus |
exon |
58209 |
58839 |
. |
- |
. |
ID=Dca10628.1.exon2;Parent=Dca10628.1 |
| scaffold1469 |
Augustus |
exon |
59034 |
59177 |
. |
- |
. |
ID=Dca10628.1.exon3;Parent=Dca10628.1 |
| scaffold1469 |
Augustus |
exon |
59346 |
59663 |
. |
- |
. |
ID=Dca10628.1.exon4;Parent=Dca10628.1 |
