Dca10635.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1469)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10635.1 |
2 |
333 |
349 |
57.59 |
332 |
55 |
9e-111
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
135 |
505 |
964 |
38.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10635.1 |
2 |
229 |
349 |
26.07 |
228 |
40 |
4e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
549 |
779 |
1428 |
16.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1469 |
Augustus |
mRNA |
90217 |
91373 |
. |
+ |
. |
ID=Dca10635.1;Parent=Dca10635 |
| scaffold1469 |
Augustus |
exon |
90217 |
91039 |
. |
+ |
. |
ID=Dca10635.1.exon1;Parent=Dca10635.1 |
| scaffold1469 |
Augustus |
exon |
91147 |
91373 |
. |
+ |
. |
ID=Dca10635.1.exon2;Parent=Dca10635.1 |
