Carnation DB

Dca10653.1

Annotation

7-exons
f-1
sp|B9SN41_RICCO#RNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0312560#GO:0004525;GO:0003723;GO:0006396#2F1P0C
Repeat List (scaffold147)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10653.1	3	235	254	56.69	233	60	3e-72
Target_name	Start	End	Length	Cov(%)
sp\|B9SN41_RICCO	8	238	248	93.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10653.1	1	233	254	49.21	233	54	8e-65
Target_name	Start	End	Length	Cov(%)
AT1G55140.1	1	228	237	96.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold147	Augustus	mRNA	81552	84603	.	-	.	ID=Dca10653.1;Parent=Dca10653
scaffold147	Augustus	exon	81552	81610	.	-	.	ID=Dca10653.1.exon1;Parent=Dca10653.1
scaffold147	Augustus	exon	81699	81804	.	-	.	ID=Dca10653.1.exon2;Parent=Dca10653.1
scaffold147	Augustus	exon	81920	82022	.	-	.	ID=Dca10653.1.exon3;Parent=Dca10653.1
scaffold147	Augustus	exon	82195	82247	.	-	.	ID=Dca10653.1.exon4;Parent=Dca10653.1
scaffold147	Augustus	exon	82521	82610	.	-	.	ID=Dca10653.1.exon5;Parent=Dca10653.1
scaffold147	Augustus	exon	83425	83558	.	-	.	ID=Dca10653.1.exon6;Parent=Dca10653.1
scaffold147	Augustus	exon	84384	84603	.	-	.	ID=Dca10653.1.exon7;Parent=Dca10653.1