Carnation DB

Dca10730.1

Annotation

5-exons
f-1
sp|B9IQF4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_780590#unknown#0F0P0C
AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:13040092-13041907 FORWARD LENGTH=259
Repeat List (scaffold1473)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10730.1	15	233	241	56.43	219	59	1e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9IQF4_POPTR	26	244	246	89.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10730.1	8	231	241	52.69	224	53	3e-55
Target_name	Start	End	Length	Cov(%)
AT1G35460.1	20	253	259	90.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1473	Augustus	mRNA	26066	28507	.	+	.	ID=Dca10730.1;Parent=Dca10730
scaffold1473	Augustus	exon	26066	26461	.	+	.	ID=Dca10730.1.exon1;Parent=Dca10730.1
scaffold1473	Augustus	exon	26922	27050	.	+	.	ID=Dca10730.1.exon2;Parent=Dca10730.1
scaffold1473	Augustus	exon	27161	27226	.	+	.	ID=Dca10730.1.exon3;Parent=Dca10730.1
scaffold1473	Augustus	exon	28276	28344	.	+	.	ID=Dca10730.1.exon4;Parent=Dca10730.1
scaffold1473	Augustus	exon	28442	28507	.	+	.	ID=Dca10730.1.exon5;Parent=Dca10730.1