Carnation DB

Dca1078.1

Annotation

8-exons
f-1
sp|F6H5C3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g00110#GO:0019901;GO:0000079;GO:0006355;GO:0006396#1F3P0C
sp|G7KC19_MEDTR#Cyclin-L1-1#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g010140#GO:0019901;GO:0000079;GO:0006355;GO:0006396#1F3P0C
Repeat List (scaffold103)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1078.1	1	428	464	64.22	428	69	4e-156
Target_name	Start	End	Length	Cov(%)
sp\|F6H5C3_VITVI	1	419	545	76.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1078.1	1	460	464	62.5	460	63	5e-151
Target_name	Start	End	Length	Cov(%)
AT2G26430.1	1	414	416	99.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold103	Augus-PASA	mRNA	145167	147896	.	-	.	ID=Dca1078.1;Parent=Dca1078
scaffold103	Augus-PASA	exon	145167	145237	.	-	.	ID=Dca1078.1.exon1;Parent=Dca1078.1
scaffold103	Augus-PASA	exon	145327	145365	.	-	.	ID=Dca1078.1.exon2;Parent=Dca1078.1
scaffold103	Augus-PASA	exon	145476	145950	.	-	.	ID=Dca1078.1.exon3;Parent=Dca1078.1
scaffold103	Augus-PASA	exon	146146	146419	.	-	.	ID=Dca1078.1.exon4;Parent=Dca1078.1
scaffold103	Augus-PASA	exon	147032	147201	.	-	.	ID=Dca1078.1.exon5;Parent=Dca1078.1
scaffold103	Augus-PASA	exon	147334	147465	.	-	.	ID=Dca1078.1.exon6;Parent=Dca1078.1
scaffold103	Augus-PASA	exon	147584	147665	.	-	.	ID=Dca1078.1.exon7;Parent=Dca1078.1
scaffold103	Augus-PASA	exon	147745	147896	.	-	.	ID=Dca1078.1.exon8;Parent=Dca1078.1