Dca10804.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold14785)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10804.1 |
220 |
901 |
901 |
49.05 |
682 |
60 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
493 |
1239 |
1501 |
49.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10804.1 |
247 |
901 |
901 |
31.29 |
655 |
41 |
2e-138
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
555 |
1232 |
1539 |
44.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold14785 |
Augustus |
mRNA |
1 |
3153 |
. |
- |
. |
ID=Dca10804.1;Parent=Dca10804 |
| scaffold14785 |
Augustus |
exon |
1 |
778 |
. |
- |
. |
ID=Dca10804.1.exon1;Parent=Dca10804.1 |
| scaffold14785 |
Augustus |
exon |
954 |
2321 |
. |
- |
. |
ID=Dca10804.1.exon2;Parent=Dca10804.1 |
| scaffold14785 |
Augustus |
exon |
2595 |
3153 |
. |
- |
. |
ID=Dca10804.1.exon3;Parent=Dca10804.1 |
