Carnation DB

Dca10823.1

Annotation

8-exons
f-1
sp|B9MVC8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_740227#GO:0005524;GO:0016776#2F0P0C
AT5G26667.1 | Symbols: PYR6 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:9276659-9277788 FORWARD LENGTH=208
Repeat List (scaffold148)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10823.1	1	203	204	77.45	203	78	4e-90
Target_name	Start	End	Length	Cov(%)
sp\|B9MVC8_POPTR	1	198	199	99.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10823.1	1	202	204	76.47	202	78	3e-88
Target_name	Start	End	Length	Cov(%)
AT5G26667.1	1	200	208	96.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold148	Augustus	mRNA	38813	40394	.	-	.	ID=Dca10823.1;Parent=Dca10823
scaffold148	Augustus	exon	38813	38824	.	-	.	ID=Dca10823.1.exon1;Parent=Dca10823.1
scaffold148	Augus-PASA	exon	38934	39005	.	-	.	ID=Dca10823.1.exon2;Parent=Dca10823.1
scaffold148	Augus-PASA	exon	39114	39221	.	-	.	ID=Dca10823.1.exon3;Parent=Dca10823.1
scaffold148	Augus-PASA	exon	39323	39403	.	-	.	ID=Dca10823.1.exon4;Parent=Dca10823.1
scaffold148	Augus-PASA	exon	39485	39641	.	-	.	ID=Dca10823.1.exon5;Parent=Dca10823.1
scaffold148	Augus-PASA	exon	39771	39888	.	-	.	ID=Dca10823.1.exon6;Parent=Dca10823.1
scaffold148	Augus-PASA	exon	40206	40242	.	-	.	ID=Dca10823.1.exon7;Parent=Dca10823.1
scaffold148	Augustus	exon	40365	40394	.	-	.	ID=Dca10823.1.exon8;Parent=Dca10823.1