Carnation DB

Dca1084.1

Annotation

3-exons
f-1
sp|Q9MBB6_SALGI#Pectinesterase#Salix gilgiana (Willow)#Name=SgPME1#GO:0005618;GO:0045330;GO:0004857;GO:0030599;GO:0042545#3F1P1C
Repeat List (scaffold103)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1084.1	1	616	619	52.01	616	52	0
Target_name	Start	End	Length	Cov(%)
sp\|Q9MBB6_SALGI	1	596	596	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1084.1	1	618	619	48.62	618	47	1e-164
Target_name	Start	End	Length	Cov(%)
AT2G26450.1	1	613	614	99.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold103	Augustus	mRNA	196516	198560	.	-	.	ID=Dca1084.1;Parent=Dca1084
scaffold103	Augustus	exon	196516	197216	.	-	.	ID=Dca1084.1.exon1;Parent=Dca1084.1
scaffold103	Augustus	exon	197298	197458	.	-	.	ID=Dca1084.1.exon2;Parent=Dca1084.1
scaffold103	Augustus	exon	197563	198560	.	-	.	ID=Dca1084.1.exon3;Parent=Dca1084.1
scaffold103	Augustus	mRNA	197284	198560	.	-	.	ID=Dca1084.2;Parent=Dca1084
scaffold103	Augustus	exon	197284	197458	.	-	.	ID=Dca1084.2.exon1;Parent=Dca1084.2
scaffold103	Augustus	exon	197563	198560	.	-	.	ID=Dca1084.2.exon2;Parent=Dca1084.2