Carnation DB

Dca10840.1

Annotation

5-exons
f-1
sp|B9RJV3_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1039150#GO:0005622;GO:0005096;GO:0007165#1F1P1C
AT5G12150.1 | Symbols: | Rho GTPase activation protein (RhoGAP) with PH domain | chr5:3924393-3930100 REVERSE LENGTH=827
Repeat List (scaffold148)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10840.1	14	367	513	27.68	354	37	8e-37
Target_name	Start	End	Length	Cov(%)
sp\|B9RJV3_RICCO	600	950	980	35.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10840.1	21	285	513	20.85	265	38	2e-31
Target_name	Start	End	Length	Cov(%)
AT5G12150.1	566	812	827	29.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold148	Augustus	mRNA	130919	132979	.	-	.	ID=Dca10840.1;Parent=Dca10840
scaffold148	Augustus	exon	130919	131719	.	-	.	ID=Dca10840.1.exon1;Parent=Dca10840.1
scaffold148	Augustus	exon	131834	132016	.	-	.	ID=Dca10840.1.exon2;Parent=Dca10840.1
scaffold148	Augustus	exon	132194	132358	.	-	.	ID=Dca10840.1.exon3;Parent=Dca10840.1
scaffold148	Augustus	exon	132475	132582	.	-	.	ID=Dca10840.1.exon4;Parent=Dca10840.1
scaffold148	Augustus	exon	132695	132979	.	-	.	ID=Dca10840.1.exon5;Parent=Dca10840.1