Carnation DB

Dca10841.1

Annotation

12-exons
f-1
sp|B9GN25_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_551643#GO:0005096;GO:0007165#1F1P0C
AT4G24580.1 | Symbols: REN1 | Rho GTPase activation protein (RhoGAP) with PH domain | chr4:12687879-12694248 REVERSE LENGTH=933
Repeat List (scaffold148)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10841.1	42	446	450	60.44	405	67	3e-138
Target_name	Start	End	Length	Cov(%)
sp\|B9GN25_POPTR	68	472	904	44.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10841.1	42	412	450	59.77	371	68	7e-134
Target_name	Start	End	Length	Cov(%)
AT4G24580.1	99	493	933	42.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold148	Augustus	mRNA	133639	137724	.	-	.	ID=Dca10841.1;Parent=Dca10841
scaffold148	Augustus	exon	133639	133917	.	-	.	ID=Dca10841.1.exon1;Parent=Dca10841.1
scaffold148	Augustus	exon	134070	134316	.	-	.	ID=Dca10841.1.exon2;Parent=Dca10841.1
scaffold148	Augustus	exon	134475	134559	.	-	.	ID=Dca10841.1.exon3;Parent=Dca10841.1
scaffold148	Augustus	exon	134846	134915	.	-	.	ID=Dca10841.1.exon4;Parent=Dca10841.1
scaffold148	Augustus	exon	135010	135065	.	-	.	ID=Dca10841.1.exon5;Parent=Dca10841.1
scaffold148	Augustus	exon	135197	135274	.	-	.	ID=Dca10841.1.exon6;Parent=Dca10841.1
scaffold148	Augustus	exon	135437	135556	.	-	.	ID=Dca10841.1.exon7;Parent=Dca10841.1
scaffold148	Augustus	exon	135683	135827	.	-	.	ID=Dca10841.1.exon8;Parent=Dca10841.1
scaffold148	Augustus	exon	135957	136035	.	-	.	ID=Dca10841.1.exon9;Parent=Dca10841.1
scaffold148	Augustus	exon	136224	136294	.	-	.	ID=Dca10841.1.exon10;Parent=Dca10841.1
scaffold148	Augustus	exon	137181	137270	.	-	.	ID=Dca10841.1.exon11;Parent=Dca10841.1
scaffold148	Augustus	exon	137692	137724	.	-	.	ID=Dca10841.1.exon12;Parent=Dca10841.1