Carnation DB

Dca1088.1

Annotation

6-exons
f-1
sp|F6HGY9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g00260#GO:0016791#1F0P0C
AT4G33140.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:15981648-15984135 FORWARD LENGTH=353
Repeat List (scaffold103)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1088.1	1	265	268	73.88	265	71	2e-109
Target_name	Start	End	Length	Cov(%)
sp\|F6HGY9_VITVI	49	319	319	84.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1088.1	62	265	268	57.83	204	76	5e-96
Target_name	Start	End	Length	Cov(%)
AT4G33140.1	148	351	353	57.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold103	Augus-PASA	mRNA	211150	215548	.	-	.	ID=Dca1088.1;Parent=Dca1088
scaffold103	Augus-PASA	exon	211150	211363	.	-	.	ID=Dca1088.1.exon1;Parent=Dca1088.1
scaffold103	Augus-PASA	exon	211472	211606	.	-	.	ID=Dca1088.1.exon2;Parent=Dca1088.1
scaffold103	Augus-PASA	exon	211696	211816	.	-	.	ID=Dca1088.1.exon3;Parent=Dca1088.1
scaffold103	Augus-PASA	exon	213988	214012	.	-	.	ID=Dca1088.1.exon4;Parent=Dca1088.1
scaffold103	Augus-PASA	exon	214298	214395	.	-	.	ID=Dca1088.1.exon5;Parent=Dca1088.1
scaffold103	Augus-PASA	exon	215335	215548	.	-	.	ID=Dca1088.1.exon6;Parent=Dca1088.1