Carnation DB

Dca109.1

Annotation

12-exons
f-1
sp|F6I632_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0046g02510#GO:0016592;GO:0001104#1F0P1C
Os07t0648266-00 Similar to 2-oxo acid dehydrogenase, lipoyl-binding site.
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca109.1	1	2191	2191	59.83	2191	58	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I632_VITVI	1	2235	2235	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca109.1	1	2191	2191	51.39	2191	49	0
Target_name	Start	End	Length	Cov(%)
AT4G00450.1	1	2253	2253	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augustus	mRNA	950451	960914	.	-	.	ID=Dca109.1;Parent=Dca109
scaffold1	Augustus	exon	950451	950891	.	-	.	ID=Dca109.1.exon1;Parent=Dca109.1
scaffold1	Augustus	exon	951212	951542	.	-	.	ID=Dca109.1.exon2;Parent=Dca109.1
scaffold1	Augustus	exon	951651	954132	.	-	.	ID=Dca109.1.exon3;Parent=Dca109.1
scaffold1	Augustus	exon	954845	957134	.	-	.	ID=Dca109.1.exon4;Parent=Dca109.1
scaffold1	Augustus	exon	957558	957893	.	-	.	ID=Dca109.1.exon5;Parent=Dca109.1
scaffold1	Augustus	exon	958050	958199	.	-	.	ID=Dca109.1.exon6;Parent=Dca109.1
scaffold1	Augustus	exon	959288	959395	.	-	.	ID=Dca109.1.exon7;Parent=Dca109.1
scaffold1	Augustus	exon	959511	959564	.	-	.	ID=Dca109.1.exon8;Parent=Dca109.1
scaffold1	Augustus	exon	959691	959759	.	-	.	ID=Dca109.1.exon9;Parent=Dca109.1
scaffold1	Augustus	exon	959891	959996	.	-	.	ID=Dca109.1.exon10;Parent=Dca109.1
scaffold1	Augustus	exon	960564	960629	.	-	.	ID=Dca109.1.exon11;Parent=Dca109.1
scaffold1	Augustus	exon	960772	960914	.	-	.	ID=Dca109.1.exon12;Parent=Dca109.1