Dca10907.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1482)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10907.1 |
1 |
208 |
210 |
74.28 |
208 |
61 |
4e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
705 |
962 |
964 |
26.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10907.1 |
31 |
206 |
210 |
34.28 |
176 |
40 |
7e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1243 |
1420 |
1428 |
12.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1482 |
Augustus |
mRNA |
70088 |
70869 |
. |
- |
. |
ID=Dca10907.1;Parent=Dca10907 |
| scaffold1482 |
Augustus |
exon |
70088 |
70623 |
. |
- |
. |
ID=Dca10907.1.exon1;Parent=Dca10907.1 |
| scaffold1482 |
Augustus |
exon |
70773 |
70869 |
. |
- |
. |
ID=Dca10907.1.exon2;Parent=Dca10907.1 |
