Dca10929.1
Annotation
- 2-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1484)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10929.1 |
11 |
409 |
419 |
32.93 |
399 |
33 |
3e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
12 |
405 |
1296 |
30.4 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10929.1 |
7 |
361 |
419 |
29.11 |
355 |
34 |
8e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48050.1 |
9 |
349 |
369 |
92.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1484 |
Augustus |
mRNA |
12797 |
14208 |
. |
+ |
. |
ID=Dca10929.1;Parent=Dca10929 |
| scaffold1484 |
Augustus |
exon |
12797 |
14021 |
. |
+ |
. |
ID=Dca10929.1.exon1;Parent=Dca10929.1 |
| scaffold1484 |
Augustus |
exon |
14174 |
14208 |
. |
+ |
. |
ID=Dca10929.1.exon2;Parent=Dca10929.1 |
