Carnation DB

Dca10945.1

Annotation

10-exons
f-1
sp|D7TIU8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g04670#GO:0005524;GO:0004356;GO:0006542#2F1P0C
AT3G53180.1 | Symbols: | glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases | chr3:19707068-19711188 FORWARD LENGTH=852
Repeat List (scaffold1485)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10945.1	58	473	473	58.98	416	67	5e-170
Target_name	Start	End	Length	Cov(%)
sp\|D7TIU8_VITVI	425	840	840	49.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10945.1	59	473	473	55.39	415	63	9e-158
Target_name	Start	End	Length	Cov(%)
AT3G53180.1	438	852	852	48.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1485	Augustus	mRNA	14680	22000	.	+	.	ID=Dca10945.1;Parent=Dca10945
scaffold1485	Augustus	exon	14680	14850	.	+	.	ID=Dca10945.1.exon1;Parent=Dca10945.1
scaffold1485	Augustus	exon	16575	16747	.	+	.	ID=Dca10945.1.exon2;Parent=Dca10945.1
scaffold1485	Augustus	exon	17027	17147	.	+	.	ID=Dca10945.1.exon3;Parent=Dca10945.1
scaffold1485	Augustus	exon	17252	17304	.	+	.	ID=Dca10945.1.exon4;Parent=Dca10945.1
scaffold1485	Augustus	exon	17408	17537	.	+	.	ID=Dca10945.1.exon5;Parent=Dca10945.1
scaffold1485	Augustus	exon	17909	18054	.	+	.	ID=Dca10945.1.exon6;Parent=Dca10945.1
scaffold1485	Augustus	exon	20714	20899	.	+	.	ID=Dca10945.1.exon7;Parent=Dca10945.1
scaffold1485	Augustus	exon	21213	21445	.	+	.	ID=Dca10945.1.exon8;Parent=Dca10945.1
scaffold1485	Augustus	exon	21620	21762	.	+	.	ID=Dca10945.1.exon9;Parent=Dca10945.1
scaffold1485	Augustus	exon	21935	22000	.	+	.	ID=Dca10945.1.exon10;Parent=Dca10945.1