Carnation DB

Dca10979.1

Annotation

8-exons
f-1
sp|B9HPD0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_879725#GO:0006397#0F1P0C
sp|G7JCF1_MEDTR#Serine/arginine repetitive matrix protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g064740#GO:0006397#0F1P0C
Repeat List (scaffold1487)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10979.1	1	161	376	35.37	161	81	3e-69
Target_name	Start	End	Length	Cov(%)
sp\|B9HPD0_POPTR	1	165	174	94.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10979.1	1	163	376	34.3	163	78	4e-68
Target_name	Start	End	Length	Cov(%)
Os03t0270200-01	1	165	841	19.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1487	Augustus	mRNA	60829	64670	.	+	.	ID=Dca10979.1;Parent=Dca10979
scaffold1487	Augustus	exon	60829	60849	.	+	.	ID=Dca10979.1.exon1;Parent=Dca10979.1
scaffold1487	Augustus	exon	61030	61119	.	+	.	ID=Dca10979.1.exon2;Parent=Dca10979.1
scaffold1487	Augustus	exon	61218	61343	.	+	.	ID=Dca10979.1.exon3;Parent=Dca10979.1
scaffold1487	Augustus	exon	61929	62096	.	+	.	ID=Dca10979.1.exon4;Parent=Dca10979.1
scaffold1487	Augustus	exon	62185	62262	.	+	.	ID=Dca10979.1.exon5;Parent=Dca10979.1
scaffold1487	Augustus	exon	62401	62519	.	+	.	ID=Dca10979.1.exon6;Parent=Dca10979.1
scaffold1487	Augustus	exon	62876	62931	.	+	.	ID=Dca10979.1.exon7;Parent=Dca10979.1
scaffold1487	Augustus	exon	64198	64670	.	+	.	ID=Dca10979.1.exon8;Parent=Dca10979.1