Carnation DB

Dca11001.1

Annotation

5-exons
f-1
sp|Q2QP22_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g35950#unknown#0F0P0C
Repeat List (scaffold1489)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11001.1	103	231	374	11.49	129	34	1e-14
Target_name	Start	End	Length	Cov(%)
sp\|Q2QP22_ORYSJ	80	206	502	25.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11001.1	68	230	374	14.17	163	31	4e-14
Target_name	Start	End	Length	Cov(%)
Os08t0367300-00	75	245	686	24.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1489	Augustus	mRNA	44996	48117	.	-	.	ID=Dca11001.1;Parent=Dca11001
scaffold1489	Augustus	exon	44996	45025	.	-	.	ID=Dca11001.1.exon1;Parent=Dca11001.1
scaffold1489	Augustus	exon	46220	46624	.	-	.	ID=Dca11001.1.exon2;Parent=Dca11001.1
scaffold1489	Augustus	exon	47203	47415	.	-	.	ID=Dca11001.1.exon3;Parent=Dca11001.1
scaffold1489	Augustus	exon	47535	47776	.	-	.	ID=Dca11001.1.exon4;Parent=Dca11001.1
scaffold1489	Augustus	exon	47883	48117	.	-	.	ID=Dca11001.1.exon5;Parent=Dca11001.1