Carnation DB

Dca11030.1

Annotation

6-exons
f-1
sp|B9I9R2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_572689#GO:0016021#0F0P1C
sp|B9SAS0_RICCO#Protein translocase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1178330#GO:0016021#0F0P1C
Repeat List (scaffold149)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11030.1	1	130	130	60.76	130	61	3e-35
Target_name	Start	End	Length	Cov(%)
sp\|B9I9R2_POPTR	1	130	130	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11030.1	1	129	130	50.76	129	52	9e-31
Target_name	Start	End	Length	Cov(%)
AT3G62880.1	1	129	136	94.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold149	Augus-PASA	mRNA	191849	193683	.	+	.	ID=Dca11030.1;Parent=Dca11030
scaffold149	Augus-PASA	exon	191849	191920	.	+	.	ID=Dca11030.1.exon1;Parent=Dca11030.1
scaffold149	Augus-PASA	exon	192023	192074	.	+	.	ID=Dca11030.1.exon2;Parent=Dca11030.1
scaffold149	Augus-PASA	exon	192765	192796	.	+	.	ID=Dca11030.1.exon3;Parent=Dca11030.1
scaffold149	Augus-PASA	exon	192891	192924	.	+	.	ID=Dca11030.1.exon4;Parent=Dca11030.1
scaffold149	Augus-PASA	exon	193387	193454	.	+	.	ID=Dca11030.1.exon5;Parent=Dca11030.1
scaffold149	Augustus	exon	193549	193683	.	+	.	ID=Dca11030.1.exon6;Parent=Dca11030.1