Dca11100.1
Annotation
- 3-exons
- f-1
- sp|O64473_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g19100#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1494)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11100.1 |
3 |
637 |
677 |
29.54 |
635 |
31 |
3e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O64473_ARATH |
576 |
1162 |
1447 |
40.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11100.1 |
3 |
370 |
677 |
18.46 |
368 |
34 |
2e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
252 |
621 |
626 |
59.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1494 |
Augustus |
mRNA |
20834 |
23248 |
. |
- |
. |
ID=Dca11100.1;Parent=Dca11100 |
| scaffold1494 |
Augustus |
exon |
20834 |
21570 |
. |
- |
. |
ID=Dca11100.1.exon1;Parent=Dca11100.1 |
| scaffold1494 |
Augustus |
exon |
21835 |
21907 |
. |
- |
. |
ID=Dca11100.1.exon2;Parent=Dca11100.1 |
| scaffold1494 |
Augustus |
exon |
22025 |
23248 |
. |
- |
. |
ID=Dca11100.1.exon3;Parent=Dca11100.1 |
