Carnation DB

Dca11201.1

Annotation

8-exons
f-1
sp|F6HCX6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0234g00080#GO:0003824#1F0P0C
sp|B9T286_RICCO#Methylglutaconyl-CoA hydratase, mitochondrial, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0191380#GO:0004490#1F0P0C
Repeat List (scaffold15)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11201.1	1	302	302	70.19	302	71	7e-119
Target_name	Start	End	Length	Cov(%)
sp\|F6HCX6_VITVI	1	295	295	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11201.1	20	302	302	59.93	283	64	3e-106
Target_name	Start	End	Length	Cov(%)
Os02t0654100-01	20	300	301	93.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15	Augus-PASA	mRNA	180068	182554	.	-	.	ID=Dca11201.1;Parent=Dca11201
scaffold15	Augus-PASA	exon	180068	180244	.	-	.	ID=Dca11201.1.exon1;Parent=Dca11201.1
scaffold15	Augus-PASA	exon	180471	180547	.	-	.	ID=Dca11201.1.exon2;Parent=Dca11201.1
scaffold15	Augus-PASA	exon	180633	180736	.	-	.	ID=Dca11201.1.exon3;Parent=Dca11201.1
scaffold15	Augus-PASA	exon	180908	180959	.	-	.	ID=Dca11201.1.exon4;Parent=Dca11201.1
scaffold15	Augus-PASA	exon	181066	181156	.	-	.	ID=Dca11201.1.exon5;Parent=Dca11201.1
scaffold15	Augus-PASA	exon	181384	181458	.	-	.	ID=Dca11201.1.exon6;Parent=Dca11201.1
scaffold15	Augus-PASA	exon	181536	181705	.	-	.	ID=Dca11201.1.exon7;Parent=Dca11201.1
scaffold15	Augus-PASA	exon	182392	182554	.	-	.	ID=Dca11201.1.exon8;Parent=Dca11201.1