Carnation DB

Dca11217.1

Annotation

10-exons
f-1
sp|B9N2U3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1114138#unknown#0F0P0C
sp|B9RUR4_RICCO#Novel plant snare, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0855800#unknown#0F0P0C
Repeat List (scaffold15)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11217.1	1	261	261	84.29	261	84	2e-117
Target_name	Start	End	Length	Cov(%)
sp\|B9N2U3_POPTR	1	262	266	98.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11217.1	1	257	261	78.92	257	79	2e-109
Target_name	Start	End	Length	Cov(%)
AT2G35190.1	1	261	265	98.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15	Augus-PASA	mRNA	316314	320591	.	+	.	ID=Dca11217.1;Parent=Dca11217
scaffold15	Augus-PASA	exon	316314	316390	.	+	.	ID=Dca11217.1.exon1;Parent=Dca11217.1
scaffold15	Augus-PASA	exon	317128	317220	.	+	.	ID=Dca11217.1.exon2;Parent=Dca11217.1
scaffold15	Augus-PASA	exon	317860	317953	.	+	.	ID=Dca11217.1.exon3;Parent=Dca11217.1
scaffold15	Augus-PASA	exon	318166	318203	.	+	.	ID=Dca11217.1.exon4;Parent=Dca11217.1
scaffold15	Augus-PASA	exon	318601	318689	.	+	.	ID=Dca11217.1.exon5;Parent=Dca11217.1
scaffold15	Augus-PASA	exon	319162	319241	.	+	.	ID=Dca11217.1.exon6;Parent=Dca11217.1
scaffold15	Augus-PASA	exon	319704	319760	.	+	.	ID=Dca11217.1.exon7;Parent=Dca11217.1
scaffold15	Augus-PASA	exon	319883	319975	.	+	.	ID=Dca11217.1.exon8;Parent=Dca11217.1
scaffold15	Augus-PASA	exon	320054	320128	.	+	.	ID=Dca11217.1.exon9;Parent=Dca11217.1
scaffold15	Augus-PASA	exon	320502	320591	.	+	.	ID=Dca11217.1.exon10;Parent=Dca11217.1