Carnation DB

Dca11230.1

Annotation

10-exons
f-1
sp|F6HTC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g00570#GO:0005634;GO:0003677;GO:0000156;GO:0006355#2F1P1C
AT4G18020.1 | Symbols: APRR2, PRR2 | CheY-like two-component responsive regulator family protein | chr4:10003738-10006682 REVERSE LENGTH=535
Repeat List (scaffold15)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11230.1	1	543	553	60.57	543	58	2e-165
Target_name	Start	End	Length	Cov(%)
sp\|F6HTC7_VITVI	1	551	558	98.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11230.1	1	552	553	50.09	552	48	8e-114
Target_name	Start	End	Length	Cov(%)
AT4G18020.1	1	535	535	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15	Augustus	mRNA	475313	480986	.	+	.	ID=Dca11230.1;Parent=Dca11230
scaffold15	Augustus	exon	475313	475442	.	+	.	ID=Dca11230.1.exon1;Parent=Dca11230.1
scaffold15	Augustus	exon	476881	476960	.	+	.	ID=Dca11230.1.exon2;Parent=Dca11230.1
scaffold15	Augustus	exon	477075	477141	.	+	.	ID=Dca11230.1.exon3;Parent=Dca11230.1
scaffold15	Augustus	exon	477260	477306	.	+	.	ID=Dca11230.1.exon4;Parent=Dca11230.1
scaffold15	Augustus	exon	477410	477487	.	+	.	ID=Dca11230.1.exon5;Parent=Dca11230.1
scaffold15	Augustus	exon	477561	478220	.	+	.	ID=Dca11230.1.exon6;Parent=Dca11230.1
scaffold15	Augus-PASA	exon	478303	478587	.	+	.	ID=Dca11230.1.exon7;Parent=Dca11230.1
scaffold15	Augus-PASA	exon	478706	478777	.	+	.	ID=Dca11230.1.exon8;Parent=Dca11230.1
scaffold15	Augus-PASA	exon	478908	478976	.	+	.	ID=Dca11230.1.exon9;Parent=Dca11230.1
scaffold15	Augus-PASA	exon	480813	480986	.	+	.	ID=Dca11230.1.exon10;Parent=Dca11230.1