Carnation DB

Dca11239.1

Annotation

5-exons
f-1
sp|B9MTZ3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_796419#GO:0006857#0F1P0C
AT1G32450.1 | Symbols: NRT1.5 | nitrate transporter 1.5 | chr1:11715337-11719807 REVERSE LENGTH=614
Repeat List (scaffold15)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11239.1	15	600	600	75.66	586	78	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MTZ3_POPTR	6	591	591	99.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11239.1	1	597	600	71.83	597	72	0
Target_name	Start	End	Length	Cov(%)
AT1G32450.1	1	598	614	97.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15	Augus-PASA	mRNA	544723	550143	.	+	.	ID=Dca11239.1;Parent=Dca11239
scaffold15	Augus-PASA	exon	544723	544749	.	+	.	ID=Dca11239.1.exon1;Parent=Dca11239.1
scaffold15	Augus-PASA	exon	545010	545130	.	+	.	ID=Dca11239.1.exon2;Parent=Dca11239.1
scaffold15	Augus-PASA	exon	548319	548536	.	+	.	ID=Dca11239.1.exon3;Parent=Dca11239.1
scaffold15	Augus-PASA	exon	548622	549184	.	+	.	ID=Dca11239.1.exon4;Parent=Dca11239.1
scaffold15	Augus-PASA	exon	549270	550143	.	+	.	ID=Dca11239.1.exon5;Parent=Dca11239.1