Dca11240.1
Annotation
- 4-exons
- f-1
- sp|B9MU13_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_826604#GO:0016787#1F0P0C
- sp|G7JZY6_MEDTR#N-acetylornithine deacetylase-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g014410#GO:0016787#1F0P0C
- Repeat List (scaffold15)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11240.1 |
5 |
254 |
254 |
75.59 |
250 |
77 |
3e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MU13_POPTR |
3 |
248 |
435 |
56.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11240.1 |
2 |
254 |
254 |
72.44 |
253 |
72 |
7e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G17830.2 |
4 |
257 |
445 |
57.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15 |
Augustus |
mRNA |
573812 |
575821 |
. |
+ |
. |
ID=Dca11240.1;Parent=Dca11240 |
| scaffold15 |
Augustus |
exon |
573812 |
574153 |
. |
+ |
. |
ID=Dca11240.1.exon1;Parent=Dca11240.1 |
| scaffold15 |
Augustus |
exon |
575202 |
575446 |
. |
+ |
. |
ID=Dca11240.1.exon2;Parent=Dca11240.1 |
| scaffold15 |
Augustus |
exon |
575563 |
575671 |
. |
+ |
. |
ID=Dca11240.1.exon3;Parent=Dca11240.1 |
| scaffold15 |
Augustus |
exon |
575753 |
575821 |
. |
+ |
. |
ID=Dca11240.1.exon4;Parent=Dca11240.1 |
