Carnation DB

Dca1125.1

Annotation

6-exons
f-1
sp|A5BCC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040650#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold1031)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1125.1	93	1333	1398	35.97	1241	38	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BCC7_VITVI	5	1310	1316	99.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1125.1	512	1318	1398	19.59	807	33	3e-131
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	566	1378	1401	58.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1031	Augustus	mRNA	13956	22794	.	+	.	ID=Dca1125.1;Parent=Dca1125
scaffold1031	Augustus	exon	13956	13979	.	+	.	ID=Dca1125.1.exon1;Parent=Dca1125.1
scaffold1031	Augustus	exon	14374	14581	.	+	.	ID=Dca1125.1.exon2;Parent=Dca1125.1
scaffold1031	Augustus	exon	18433	19251	.	+	.	ID=Dca1125.1.exon3;Parent=Dca1125.1
scaffold1031	Augustus	exon	19320	19809	.	+	.	ID=Dca1125.1.exon4;Parent=Dca1125.1
scaffold1031	Augustus	exon	20052	21802	.	+	.	ID=Dca1125.1.exon5;Parent=Dca1125.1
scaffold1031	Augustus	exon	21890	22794	.	+	.	ID=Dca1125.1.exon6;Parent=Dca1125.1