Carnation DB

Dca11262.1

Annotation

6-exons
f-1
sp|F6HIE5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0059g01290#unknown#0F0P0C
Repeat List (scaffold150)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11262.1	1	251	252	83.73	251	84	1e-122
Target_name	Start	End	Length	Cov(%)
sp\|F6HIE5_VITVI	1	253	300	84.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11262.1	1	251	252	77.77	251	78	1e-112
Target_name	Start	End	Length	Cov(%)
AT2G32980.1	1	252	296	85.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold150	Augus-PASA	mRNA	138008	143078	.	+	.	ID=Dca11262.1;Parent=Dca11262
scaffold150	Augus-PASA	exon	138008	138124	.	+	.	ID=Dca11262.1.exon1;Parent=Dca11262.1
scaffold150	Augus-PASA	exon	139507	139629	.	+	.	ID=Dca11262.1.exon2;Parent=Dca11262.1
scaffold150	Augus-PASA	exon	140201	140305	.	+	.	ID=Dca11262.1.exon3;Parent=Dca11262.1
scaffold150	Augus-PASA	exon	141478	141546	.	+	.	ID=Dca11262.1.exon4;Parent=Dca11262.1
scaffold150	Augus-PASA	exon	142193	142306	.	+	.	ID=Dca11262.1.exon5;Parent=Dca11262.1
scaffold150	Augus-PASA	exon	142848	143078	.	+	.	ID=Dca11262.1.exon6;Parent=Dca11262.1