Carnation DB

Dca11271.1

Annotation

7-exons
f-1
sp|D7TGM3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0035g01750#unknown#0F0P0C
Repeat List (scaffold150)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11271.1	1	236	275	53.09	236	62	9e-81
Target_name	Start	End	Length	Cov(%)
sp\|D7TGM3_VITVI	1	236	475	49.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11271.1	1	236	275	43.27	236	51	3e-62
Target_name	Start	End	Length	Cov(%)
AT2G23390.1	1	231	469	49.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold150	Augus-PASA	mRNA	249900	256592	.	+	.	ID=Dca11271.1;Parent=Dca11271
scaffold150	Augus-PASA	exon	249900	249977	.	+	.	ID=Dca11271.1.exon1;Parent=Dca11271.1
scaffold150	Augus-PASA	exon	251928	252074	.	+	.	ID=Dca11271.1.exon2;Parent=Dca11271.1
scaffold150	Augus-PASA	exon	252181	252363	.	+	.	ID=Dca11271.1.exon3;Parent=Dca11271.1
scaffold150	Augus-PASA	exon	253383	253465	.	+	.	ID=Dca11271.1.exon4;Parent=Dca11271.1
scaffold150	Augustus	exon	253562	253760	.	+	.	ID=Dca11271.1.exon5;Parent=Dca11271.1
scaffold150	Augustus	exon	256352	256402	.	+	.	ID=Dca11271.1.exon6;Parent=Dca11271.1
scaffold150	Augustus	exon	256506	256592	.	+	.	ID=Dca11271.1.exon7;Parent=Dca11271.1