Carnation DB

Dca11276.1

Annotation

6-exons
f-1
sp|F6HLV5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g04280#GO:0005622;GO:0008270#1F0P1C
sp|B9SYJ0_RICCO#Brca1 associated ring domain, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1288560#GO:0005622;GO:0008270#1F0P1C
Repeat List (scaffold1500)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11276.1	238	362	365	16.98	125	50	1e-25
Target_name	Start	End	Length	Cov(%)
sp\|F6HLV5_VITVI	1375	1500	1505	8.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11276.1	252	359	365	11.5	108	39	2e-16
Target_name	Start	End	Length	Cov(%)
Os05t0512000-01	875	981	988	10.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1500	Augustus	mRNA	11916	16946	.	-	.	ID=Dca11276.1;Parent=Dca11276
scaffold1500	Augustus	exon	11916	12257	.	-	.	ID=Dca11276.1.exon1;Parent=Dca11276.1
scaffold1500	Augustus	exon	15151	15623	.	-	.	ID=Dca11276.1.exon2;Parent=Dca11276.1
scaffold1500	Augustus	exon	15839	15937	.	-	.	ID=Dca11276.1.exon3;Parent=Dca11276.1
scaffold1500	Augustus	exon	16559	16629	.	-	.	ID=Dca11276.1.exon4;Parent=Dca11276.1
scaffold1500	Augustus	exon	16726	16779	.	-	.	ID=Dca11276.1.exon5;Parent=Dca11276.1
scaffold1500	Augustus	exon	16888	16946	.	-	.	ID=Dca11276.1.exon6;Parent=Dca11276.1